WebSequence type 398 (ST398) Staphylococcus aureus, frequently carried by livestock, has caused severe human infections and often carries transmissible antibiotic resistance genes. Among methicillin-susceptible S. aureus isolates colonizing Dallas County Jail detainees, 13.2% were ST398, spa type t571, and were genetically similar to human colonization … WebApr 7, 2024 · The pairwise genetic distances (p-distances) were calculated for the whole data set using Mega 6 . ... (homoplasy index = 0.5152; consistency index = 0.4848; …
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WebThe use of mitochondrial DNA details in phylogenetics is controversial, nevertheless studies such combine mitochondrial and nuclear DNA data (mtDNA and nucDNA) to estimate phylogeny are common, especially in vertebrates. Surprisingly, the consequences of combining such data types are largely untested, and many fundamental questions remain … WebApr 1, 2006 · The term “pairwise homoplasy index” refers to the fact that the refined incompatibility score can be interpreted as the minimum number of convergent or recurrent mutations (homoplasies) necessarily present on any tree describing the history of any two … the great escape tunnel names
Global distribution, diversity hot spots and niche transitions of an ...
Webwere removed for our analysis and pairwise homoplasy index (PHI) calculations did not show evidence for recombination in the final dataset (p=0.2224) [29]. Sequences were … http://www.infogalactic.com/info/Distance_matrices_in_phylogeny WebNov 22, 2024 · Bruen et al. define the pairwise homoplasy index (PHI) in terms of a pairwise incompatibility score of each site and its downstream sites in a global alignment, and then … the author of the watsons go to birmingham